Structure of PDB 1rtm Chain 2 Binding Site BS01

Receptor Information

>1rtm Chain 2 (length=149) Species: 10116 (Rattus norvegicus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

AIEVKLANMEAEINTLKSKLELTNKLHAFSMGKKSGKKFFVTNHERMPFS
KVKALCSELRGTVAIPRNAEENKAIQEVAKTSAFLGITDEVTEGQFMYVT
GGRLTYSNWKKDEPNDHGSGEDCVTIVDNGLWNDISCQASHTAVCEFPA

Ligand information

Ligand ID

InChI

InChI=1S/Ca/q+2

InChIKey

BHPQYMZQTOCNFJ-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Ca++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Ca+2]

Formula

Name

CALCIUM ION

PDB chain

1rtm Chain 2 Residue 1 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	1rtm Trimeric structure of a C-type mannose-binding protein.
Resolution	1.8 Å
Binding residue (original residue number in PDB)	D161 E165 D188 E193 D194
Binding residue (residue number reindexed from 1)	D89 E93 D116 E121 D122
Annotation score	4

Enzymatic activity

Enzyme Commision number

External links

PDB	RCSB:1rtm, PDBe:1rtm, PDBj:1rtm
PDBsum	1rtm
PubMed	7704532
UniProt	P19999\|MBL1_RAT Mannose-binding protein A (Gene Name=Mbl1)

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