Structure of PDB 1kqs Chain 2 Binding Site BS01 |
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>1kqs Chain 0 (length=2754)
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uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugcca agcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuu ccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaa cugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguu aguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggca auguggugucagggcuaccucucaucagccgaccgucucgacgaagucuc uuggaacagagcgugauacagggugacaaccccguacucgagaccaguac gacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaa cgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaac aaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaaua gagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucg acgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgaugu ucugucguacguuuugaaaaacgagccagggagugugucugcauggcaag ucuaaccggaguauccggggaggcacagggaaaccgacauggccgcaggg cuugcccgagggccgccgucuucaagggcggggagccauguggacacgac ccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggca cguggaagucuguuagaguugguguccuacaauacccucucgugaucuau guguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucga aacaugucgaagcaugaccuccgccgagguagucugugagguagagcgac cgauugguccugucaaacuccaaacuuacagacgccguuugacgcgggga uuccggugcgcgggguaagccuguguaccaggaggggaacaacccagaga uagguuaagguccccaaguguggauuaaguguaauccucugaaggugguc ucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaag aaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgg gacucaaauccaccaccgagaccuguccguaccacucauacugguaaucg aguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuaugg accgauuagugacgaaaauccuggccauaguagcagcgauagucggguga gaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcu gaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugg gaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccug gggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaa gccguaauggcaggaagcggacgaacggcggcauagggaaacgugauuca accuggggcccaugaaaagacgagcauaguguccguaccgagaaccgaca cagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguu agggaauucggcaaguuagucccguaccuucggaagaagggaugccugcu ccggaacggagcaggucgcagugacucggaagcucggacugucuaguaac aacauaggugaccgcaaauccgcaaggacucguacggucacugaauccug cccagugcagguaucugaacaccucguacaagaggacgaaggaccuguca acggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcu ugcaugaauggauuaaccagagcuucacugucccaacguugggcccggug aacuguacauuccagugcggagucuggagacacccagggggaagcgaaga cccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggag gaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaa gauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagu gcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcuga cgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauu gaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagc acauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccug cccgugcagaagcgggcaagggugagguuguucgccuauuaaaggagguc gugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggg uguguaggugucugacaagaacgaccguauaguacgagaggaacuacggu ugguggccacugguguaccgguuguucgagagagcacgugccggguagcc acgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuugg aaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucg gggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacaga ccaa |
..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((. .((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...> >>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<... ..<<....>>......>>>>>.>.........<<.....>>..<<<<<<. ....<<.....>>....>>>>>>..<<<...<<<...<<<<....>>>>. ....>>>....<<<<<<<<......<..<.....<<<<<<<......<<< <......>>>>.((......<<<.....))>>>....>>>>>>>...... >..>...>>>>>>.>>......<<<<<<<........>>>>>>>...... <<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.)).......... .....<<....>>....))..........<<<.....>>>.......... .........>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..< <.........<<<<<....>>>>>.........>>..>>>>...>.>>>> >>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..< <<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<< <..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..< <.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>> >>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>> >>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<.. ..<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.... .<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>. .>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<< <<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<< <<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>..... ..<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)) )>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>> ....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>.. .>>>>>>>>....>.....>>>>>><<.....<........<<<<<<... ....>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>> >>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>> >..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<< <<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<.... <<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>.. .>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<.... ..>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<< .<<.........<.....<<<<<...............>>>>><<<<<<< <<.....>>>>>>>>>............<<<<<<<<<..<<<........ .>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.< <<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>.. >>>>><<...>>........<...........<<<<<.......>>>>>. ....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>. ...>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[..... .<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....> >>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<..... ......>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<< ...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>. <<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>> >..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.. .....>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<< <<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>.. >...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>> >>....<<<<<<...<<<<..<<<<<<<<...............>>>>>> >><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>> >.>>>>>..<<<.<..<<<<<...........>>>>>...>>>>.>>>>. ......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<< <<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>> >>.. |
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PDB | 1kqs A pre-translocational intermediate in protein synthesis observed in crystals of enzymatically active 50S subunits. |
Resolution | 3.1 Å |
Binding residue (original residue number in PDB) | M1 Q2 M3 P4 N8 T9 Y10 N15 E16 H17 G28 R29 Q30 T31 M33 K34 W35 I36 R38 Q39 R42 G45 I46 N48 G50 K51 S53 K54 D59 K60 P61 T62 K63 K64 T65 D66 K68 L79 R80 G82 R84 G86 Q91 |
Binding residue (residue number reindexed from 1) | M1 Q2 M3 P4 N8 T9 Y10 N15 E16 H17 G28 R29 Q30 T31 M33 K34 W35 I36 R38 Q39 R42 G45 I46 N48 G50 K51 S53 K54 D59 K60 P61 T62 K63 K64 T65 D66 K68 L79 R80 G82 R84 G86 Q91 |
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Enzyme Commision number |
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