Structure of PDB 8uey Chain 1P Binding Site BS01
Receptor Information
>8uey Chain 1P (length=342) Species:
9823
(Sus scrofa) [
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LHHALIPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIVPYR
CEPYDTMHLRPMGDLGQIIFMEWNGKDKDSIRKVVEHSNVVINLVGREWE
TKNFDFEDVFVKIPHAIAQVSKEAGVEKLIHISHLNADIKSPSRYLRSKA
VGEKEVRAAFPEATIIKPSDIFGREDRFLNYFASMRWFGGVPLISLGKET
VKQPVYIVDVSKGIINAIKDPDAKGKTFAFVGPNRYLLFDLVQYIFAVAY
RPFLPYPLPHFAYRWVGRLFEVSPFEPWTTRDKVERVHMSDMTLPHLPGL
EDLGIQATPLELKAIEVLRRHRTYRWLTSEMEDVKPAKTVNI
Ligand information
Ligand ID
NDP
InChI
InChI=1S/C21H30N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1,3-4,7-8,10-11,13-16,20-21,29-31H,2,5-6H2,(H2,23,32)(H,36,37)(H,38,39)(H2,22,24,25)(H2,33,34,35)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
ACFIXJIJDZMPPO-NNYOXOHSSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)O[P@@](=O)(O)OC[C@@H]4[C@H]([C@H]([C@@H](O4)N5C=CCC(=C5)C(=O)N)O)O)O)OP(=O)(O)O)N
CACTVS 3.341
NC(=O)C1=CN(C=CC1)[CH]2O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O[P](O)(O)=O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
CACTVS 3.341
NC(=O)C1=CN(C=CC1)[C@@H]2O[C@H](CO[P@@](O)(=O)O[P@](O)(=O)OC[C@H]3O[C@H]([C@H](O[P](O)(O)=O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OCC4C(C(C(O4)N5C=CCC(=C5)C(=O)N)O)O)O)OP(=O)(O)O)N
Formula
C21 H30 N7 O17 P3
Name
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
ChEMBL
CHEMBL407009
DrugBank
DB02338
ZINC
ZINC000008215411
PDB chain
8uey Chain 1P Residue 501 [
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Receptor-Ligand Complex Structure
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PDB
8uey
High-resolution in situ structures of mammalian respiratory supercomplexes.
Resolution
3.6 Å
Binding residue
(original residue number in PDB)
G25 T27 G28 F29 L30 R50 L94 G96 R97 E98 F104 F110 I132 H134 Y145 I171 R177 F178
Binding residue
(residue number reindexed from 1)
G25 T27 G28 F29 L30 R50 L94 G96 R97 E98 F104 F110 I132 H134 Y145 I171 R177 F178
Annotation score
4
Gene Ontology
Cellular Component
GO:0005739
mitochondrion
View graph for
Cellular Component
External links
PDB
RCSB:8uey
,
PDBe:8uey
,
PDBj:8uey
PDBsum
8uey
PubMed
38811722
UniProt
A0A4X1ULW2
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