Structure of PDB 7n61 Chain 1A Binding Site BS01
Receptor Information
>7n61 Chain 1A (length=404) Species:
3055
(Chlamydomonas reinhardtii) [
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VKVFVRTRPTATSGSGLKLGPDGQSVSVNVPKDLSAGPVNNQQEQFSFKF
DGVLENVSQEAAYTTLAHEVVDSLMAGYNGTIFAYGQTGAGKTFTMSGGG
TAYAHRGLIPRAIHHVFREVDMRADKMYRVHVSYLEIYNEQLYDLLGDTP
GTSDALAVLEDSNSNTYVRGLTLVPVRSEEEALAQFFLGEQGRTTAGHVL
NAESSRSHTVFTIHVEMRTSDAASERAVLSKLNLVDLAGSERTKKTGVTG
QTLKEAQFINRSLSFLEQTVNALSRKDTYVPFRQTKLTAVLRDALGGNCK
TVMVANIWAEPSHNEETLSTLRFASRVRALLLRRYERQIKELKAELAMRD
TLSGKGRVSYDDLTDDELRELHATCRRFLHGEAEPEDLPADSMKRVRETF
KALR
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
7n61 Chain 1A Residue 801 [
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Receptor-Ligand Complex Structure
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PDB
7n61
Cryo-EM structure of an active central apparatus.
Resolution
3.5 Å
Binding residue
(original residue number in PDB)
R13 T93 G94 G96 K97 T98 F99 N206 S209 S210
Binding residue
(residue number reindexed from 1)
R8 T88 G89 G91 K92 T93 F94 N201 S204 S205
Annotation score
5
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003774
cytoskeletal motor activity
GO:0003777
microtubule motor activity
GO:0005524
ATP binding
GO:0008017
microtubule binding
GO:0016887
ATP hydrolysis activity
Biological Process
GO:0007018
microtubule-based movement
Cellular Component
GO:0005871
kinesin complex
GO:0005874
microtubule
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:7n61
,
PDBe:7n61
,
PDBj:7n61
PDBsum
7n61
PubMed
35578022
UniProt
A8I9T2
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