Structure of PDB 8fnc Chain 14 Binding Site BS01

Receptor Information

>8fnc Chain 14 (length=314) Species: 5691 (Trypanosoma brucei) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

SYVLKFLRGQLPEDLKDVNGALGCLYGTLPDVDEFGQFVISPDVVNSFHQ
FGYVKMPIPVLDHQQIDKLADEVNELANNVEHHPKTERLYATSLADLTGG
PLFFCQGQWRAAWGMHDLIYLPTITVAASQILNNSLVRLWYDEVFMKAAR
TGPCVPWQQNYARWQHTKPVNHVTVMIALDTMNKDRGAPCLVPGSHRWRE
GGLLPPVSYDPTKDEAHQLNTIWEIINEEEGEMLMDTPPVTVDLRRGEAL
LIHPLTLFATHGNRSLDAVRCCFIHYMGEKTYAVQNGPLLPHTTKFQADA
MIQGPFYPVVFDPA

Ligand information

>8fnc Chain m (length=17) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

uaauagaauaagauaag

.................

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	8fnc Structural basis of gRNA stabilization and mRNA recognition in trypanosomal RNA editing.
Resolution	3.3 Å
Binding residue (original residue number in PDB)	Y37 K40
Binding residue (residue number reindexed from 1)	Y2 K5

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Cellular Component
GO:0005739	mitochondrion
GO:0031019	mitochondrial mRNA editing complex

View graph for
Cellular Component

External links

PDB	RCSB:8fnc, PDBe:8fnc, PDBj:8fnc
PDBsum	8fnc
PubMed	37410820
UniProt	Q38EL9

[Back to BioLiP]