Structure of PDB 6qnr Chain 11 Binding Site BS01 |
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| >6qnr Chain 1H (length=2890)
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ggucaagaugguaagggcccacgguggaugccucggcacccgagccgaug
aaggacguggcuaccugcgauaagccagggggagccgguagcgggcgugg
aucccuggauguccgaaugggggaacccggccggcgggaacgccggucac
cgcgcuuuuugcgcggggggaaccuggggaacugaaacaucucaguaccc
agaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggg
gaccagccuaaaccguccggcuuguccgggcggggucguggggcccucgg
accgaauccccagccuagccgaagcuguugggaagcagcgccagagaggg
ugaaagccccguaggcgaaagguggggggauaggugaggguacccgagua
ccccgugguucguggagccaugggggaaucugggcggaccaccgccuaag
gcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggu
gaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuua
caagcagucacggccccgcaagggguuguggcgugccuauugaagcauga
gccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcgu
agggaaaccgaguccgaacagggcgcaaacggccgaaaaguccgcggccg
uggacccgaaaccgggcgagcuagcccuggccagggugaagcugggguga
gacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagc
uggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccc
cgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagca
cugauagggcuagggggcccaccagccuaccaaacccugucaaacuccga
agggucccagguggagccugggagugagggcgcgagcgauaacguccgcg
uccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucuggg
cuaagugguaaaggauguggcgccgcgaagacagccaggauguuggagca
gccaucauuuaaagagugcguuagcucacuggucgaguggcgccgcgccg
aaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaug
accccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcg
agggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaa
agagggugagaaucccucucgccguaagcccaaggguuccuacgcaaugg
ucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagc
cgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggg
gacgcucuaggcuagggggaccggagccauggacgagcccggccagaagc
gcagggugggagguaggcaaauccgccucccaacaagcucugcguggugg
ggaagcccguacgggugacaaccccccgaagccagggagccaagaaaagc
cucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggc
gggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucug
caaguuggccccguaacuucgggagaaggggugcucccuggggugaugag
ccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacac
agcucucugcgaacucguaagaggagguauagggagcgacgcuugcccgg
ugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggug
aacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucgg
guaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggc
gagggacccggugaaauugaacuggccgugaagaugcggccuacccgugg
caggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuu
ggucgcgccugcguaggauaggugggagccugugaacccccgccuccggg
ugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaa
cccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucg
ccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacgga
aauccgccggagagcgcaaggguagaagggggccugacugcgaggccugc
aagccgagcaggggcgaaagccgggccuagugaaccgguggucccgugug
gaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcuga
ucucccccgagcguccacagcggcggggagguuuggcaccucgaugucgg
cucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcc
cauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggu
cucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacg
agaggaccggaagggacgcaccucugguuucccagcugucccuccagggg
cauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaa
gcgggaagcccgccccaagaugaggccucccacggcgucaagccgguaag
gacccgggaagaccacccgguggaugggccggggguguaagcgccgcgag
gcguugagccgaccggucccaaucguccgaggucuugacc |
.<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<[[<<....
..<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>....
.>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<
<<<<<.....>>>>>>.>>...<<<<<<.....<<....>>......>>>
>>.>.........<<....>>...<<<<<.....<<.....>>....>>>
>>...(((....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..
<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<
.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....
<<<<<<<<<.......>>>>>>>>>......<<<<<..<<<<>>>>>..)
))......]].>>>>>>.]]...............<<....>>....]].
........<<<<....>>>>..................>>>>>>>>>>>.
......<<<<<<<<<<<....>>>>>>>>>>>...<............>.
<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>..
.<<....>>..<<<<.....>>>>.....<<..>>....>>>>>>>>>>>
>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<....
..>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>
>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<
<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<..
.<<<<<<<<.<..<<<<<......>>>>.>..>.>>>>>>>>..>>.>..
.>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>
>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<
<...........<<..<<<<<<<<<........<<<<<.<<...<.....
..>...>>.........<<....>>...>>>>>....>>>>>>>>>.>>.
.........)))......>>>>>>.>>>...>>>>>>><<<<<<<<....
.>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<...
.>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....
<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.
....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>
>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<.
...<<<<<.<<<..<<<<<.<<<<.<<..((((...>>>>>><<<...<<
<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>>
<...<<<<....>>>>.....>>>>>>...>>>..>>>>>.........>
>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>
.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<........
.<.....<<<<<...............>>>>><<<<<<<<<<<<.....>
>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>.
.<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<
<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>.
.>>>>><<<<<<.......>>>>>>........<...........<<<<<
<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>
>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<
<.(((.........<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<<<
<<<<<<<<<...........<<.<<..<<<.......<<<<<<<....>>
>>>>>....>>>............>>.>>..>>>>>>>>>>>>>>>>...
<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><
<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.....
..>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<....
..>>>..>>>>.<<<....>>>.>>))).......<<<<<<.(((..>>>
>..)))>>>>>>.............>>>>..]]>>>>.......<<<<..
.<<<<<<<..<<.......>>>..>>>>>>....>>>.>.......<<<<
<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>
>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>...
.....)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<.......
........>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))))>>>>
>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>
>>>>....>>>.>>>>.......>>>>>>>..<<<<.....>>>>....<
<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>
>>>>...>>>..>>>>>.>>>...>>>>....>>>>>>>. |
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| PDB | 6qnr Importance of potassium ions for ribosome structure and function revealed by long-wavelength X-ray diffraction. |
| Resolution | 3.1 Å |
Binding residue
(original residue number in PDB) | K7 P8 Y9 T10 P11 R13 R14 F15 F21 K31 K35 P36 L37 K38 K39 T40 G42 R43 N44 N45 Q46 G47 R48 I49 T50 R52 R54 G55 G56 H58 K59 R60 L61 Y62 R63 Y84 P86 N87 R88 D99 G100 E101 K102 L147 E148 K151 K154 L155 A156 R157 A158 A159 G160 T161 Y172 L177 P178 S179 E181 R183 H186 A199 H201 K202 V205 G207 K208 A209 G210 R211 S212 R213 W214 L215 R218 P219 H220 V221 R222 G223 A224 A225 M226 N227 P228 V229 D230 H231 H233 G235 G236 E237 G238 R239 P241 R242 G243 R244 P245 P246 A247 S248 P249 W250 W252 Q253 T254 K255 G256 L257 K258 T259 R260 K261 R263 K264 P265 S266 R268 F269 |
Binding residue
(residue number reindexed from 1) | K6 P7 Y8 T9 P10 R12 R13 F14 F20 K30 K34 P35 L36 K37 K38 T39 G41 R42 N43 N44 Q45 G46 R47 I48 T49 R51 R53 G54 G55 H57 K58 R59 L60 Y61 R62 Y83 P85 N86 R87 D98 G99 E100 K101 L146 E147 K150 K153 L154 A155 R156 A157 A158 G159 T160 Y171 L176 P177 S178 E180 R182 H185 A198 H200 K201 V204 G206 K207 A208 G209 R210 S211 R212 W213 L214 R217 P218 H219 V220 R221 G222 A223 A224 M225 N226 P227 V228 D229 H230 H232 G234 G235 E236 G237 R238 P240 R241 G242 R243 P244 P245 A246 S247 P248 W249 W251 Q252 T253 K254 G255 L256 K257 T258 R259 K260 R262 K263 P264 S265 R267 F268 |
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| Enzyme Commision number |
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