Structure of PDB 6fo8 Chain 1 Binding Site BS01

Receptor Information

>6fo8 Chain 1 (length=236) Species: 7955 (Danio rerio) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

LSDEQMQIINSLVEAHHKTYDDSYSDFVRFRPPVRRLSMLPHLADLVSYS
IQKVIGFAKMIPGFRDLTAEDQIALLKSSAIEIIMLRSNQSFSLEDMSWS
CGGPDFKYCINDVTKAGHTLELLEPLVKFQVGLKKLKLHEEEHVLLMAIC
LLSPDRPGVQDHVRIEALQDRLCDVLQAYIRIQHPGGRLLYAKMIQKLAD
LRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGSE

Ligand information

>6fo8 Chain B (length=9) Species: 9606 (Homo sapiens) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

HKILHRLLQ

Receptor-Ligand Complex Structure

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Structure summary

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PDB	6fo8 Aromatic-Based Design of Highly Active and Noncalcemic Vitamin D Receptor Agonists.
Resolution	2.3 Å
Binding residue (original residue number in PDB)	I270 K274 I288 K292 E446 E451
Binding residue (residue number reindexed from 1)	I55 K59 I73 K77 E231 E236

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0003677	DNA binding
GO:0004879	nuclear receptor activity

	Biological Process
GO:0006355	regulation of DNA-templated transcription

	Cellular Component
GO:0005634	nucleus

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Cellular Component

External links

PDB	RCSB:6fo8, PDBe:6fo8, PDBj:6fo8
PDBsum	6fo8
PubMed	29733645
UniProt	Q9PTN2\|VDRA_DANRE Vitamin D3 receptor A (Gene Name=vdra)

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