Structure of PDB 1rdo Chain 1 Binding Site BS01

Receptor Information
>1rdo Chain 1 (length=111) Species: 10117 (Rattus rattus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KYFMSSVRRMPLNRAKALCSELQGTVATPRNAEENRAIQNVAKDVAFLGI
TDQRTENVFEDLTGNRVRYTNWNEGEPNNVGSGENCVVLLTNGKWNDVPC
SDSFLVVCEFS
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain1rdo Chain 1 Residue 1 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1rdo Structural analysis of monosaccharide recognition by rat liver mannose-binding protein.
Resolution1.7 Å
Binding residue
(original residue number in PDB)		D166 E170 N193 E198 N199
Binding residue
(residue number reindexed from 1)		D52 E56 N79 E84 N85
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:1rdo, PDBe:1rdo, PDBj:1rdo
PDBsum1rdo
PubMed8557671
UniProtP08661|MBL2_RAT Mannose-binding protein C (Gene Name=Mbl2)

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