Structure of PDB 1aym Chain 1 Binding Site BS01

Receptor Information
>1aym Chain 1 (length=285) Species: 169066 (Human rhinovirus sp.) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NPVERYVDEVLNEVLVVPNINQSHPTTSNAAPVLDAAETGHTNKIQPEDT
IETRYVQSSQTLDEMSVESFLGRSGCIHESVLDIVDNYNDQSFTKWNINL
QEMAQIRRKFEMFTYARFDSEITMVPSVAAKDGHIGHIVMQYMYVPPGAP
IPTTRDDYAWQSGTNASVFWQHGQPFPRFSLPFLSIASAYYMFYDGYDGD
TYKSRYGTVVTNDMGTLCSRIVTSEQLHKVKVVTRIYHKAKHTKAWCPRP
PRAVQYSHTHTTNYKLSSEVHNDVAIRPRTNLTTV
Ligand information
>1aym Chain 4 (length=29) Species: 169066 (Human rhinovirus sp.) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
GAQVSRQSLNYFNINYFKDAASSGASRLD
Receptor-Ligand Complex Structure
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PDB1aym The refined structure of human rhinovirus 16 at 2.15 A resolution: implications for the viral life cycle.
Resolution2.15 Å
Binding residue
(original residue number in PDB)		V3 Y6 S66 E68 D119 S180 K241 H242
Binding residue
(residue number reindexed from 1)		V3 Y6 S66 E68 D119 S180 K241 H242
Enzymatic activity
Enzyme Commision number 2.7.7.48: RNA-directed RNA polymerase.
3.4.22.28: picornain 3C.
3.4.22.29: picornain 2A.
3.6.1.15: nucleoside-triphosphate phosphatase.
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity

View graph for
Molecular Function
External links
PDB RCSB:1aym, PDBe:1aym, PDBj:1aym
PDBsum1aym
PubMed9083115
UniProtQ82122|POLG_HRV16 Genome polyprotein

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