Structure of PDB 3j6b Chain 0 Binding Site BS01

Receptor Information
>3j6b Chain 0 (length=38) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
FKVRTSVKKFCSDCYLVRRKGRVYIYCKSNKKHKQRQG
Ligand information
>3j6b Chain A (length=2713) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
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gaaaacaauaauaacuuucucggaaagaauuaaauuaauauaaugguaua
acugugcgauaauuguaacacaaacgagugaaacaaguacguaaguaugg
cauaaugaacaaauaacacugauuguaaagguuauugauaacgaauaaaa
guuacgcuagggaaggguaauauagcgaaagaguagauauuguaagcuau
guuugccaccuucgacucaacauuuccucuugguuguaaaagcuaagaag
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Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3j6b Structure of the yeast mitochondrial large ribosomal subunit.
Resolution3.2 Å
Binding residue
(original residue number in PDB)		F56 K57 V58 R59 T60 S61 V62 F65 Y70 L71 V72 R73 R74 K75 G76 R77 V78 Y79 K83 K86 K87 K89 R91 Q92
Binding residue
(residue number reindexed from 1)		F1 K2 V3 R4 T5 S6 V7 F10 Y15 L16 V17 R18 R19 K20 G21 R22 V23 Y24 K28 K31 K32 K34 R36 Q37
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0008270 zinc ion binding
Biological Process
GO:0006412 translation
GO:0032543 mitochondrial translation
GO:0042254 ribosome biogenesis
Cellular Component
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005762 mitochondrial large ribosomal subunit
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3j6b, PDBe:3j6b, PDBj:3j6b
PDBsum3j6b
PubMed24675956
UniProtO14464|RTC6_YEAST Large ribosomal subunit protein bL36m (Gene Name=RTC6)

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